Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 AC004870.1-201ENST00000315132 882 ntBASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 MIR648-201ENST00000385046 94 ntBASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 AC073648.2-201ENST00000510116 352 ntBASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 AC010654.1-201ENST00000615722 808 ntBASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 OR2I1P-210ENST00000642037 4691 ntBASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHB16Q9NRJ7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 ELK2BP-201ENST00000415014 1224 ntBASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 OR7E14P-202ENST00000530490 1290 ntBASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 KRT126P-201ENST00000549467 1181 ntBASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 AC025062.2-201ENST00000605477 670 ntBASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 SLC22A20-204ENST00000530038 1673 ntBASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 AC012569.1-201ENST00000591191 1524 ntBASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
PCDHB16Q9NRJ7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms