Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BRMS1Q9HCU9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
BRMS1Q9HCU9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BRMS1Q9HCU9 LINC02447-202ENST00000501888 2146 ntBASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 AC022188.1-201ENST00000620960 1664 ntBASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 SLC25A39P2-201ENST00000537614 270 ntBASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 AC004835.2-201ENST00000603762 682 ntBASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRMS1Q9HCU9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 AC069224.1-201ENST00000566372 1715 ntBASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 KRT18P13-201ENST00000400056 1290 ntBASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 KRT18P32-201ENST00000424695 1287 ntBASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 AC061975.2-201ENST00000581722 295 ntBASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 AC084121.4-201ENST00000641598 221 ntBASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 AF228730.8-201ENST00000642140 221 ntBASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 AC067930.6-201ENST00000623257 4947 ntBASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRMS1Q9HCU9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 AL365203.3-201ENST00000609742 2057 ntBASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 AC004461.1-201ENST00000412461 403 ntBASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 AP001282.1-201ENST00000531301 1499 ntBASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
BRMS1Q9HCU9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms