Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 MPDU1-223ENST00000582151 728 ntBASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 AC020658.6-201ENST00000623564 1870 ntBASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 AC016734.2-201ENST00000624325 1377 ntBASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SND1-IT1Q9HBX3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 SNX18-202ENST00000343017 3140 ntBASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 DRAXINP1-201ENST00000437611 948 ntBASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 ABCD1P5-201ENST00000445663 754 ntBASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 SIGLEC29P-201ENST00000599873 1114 ntBASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 GPAA1P2-202ENST00000606848 1787 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms