Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.47■□□□□ 0.07
PIF1Q9H611 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PIF1Q9H611 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.47■□□□□ 0.07
PIF1Q9H611 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PIF1Q9H611 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
PIF1Q9H611 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
PIF1Q9H611 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.47■□□□□ 0.07
PIF1Q9H611 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PIF1Q9H611 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.47■□□□□ 0.07
PIF1Q9H611 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.47■□□□□ 0.07
PIF1Q9H611 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.47■□□□□ 0.07
PIF1Q9H611 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.47■□□□□ 0.07
PIF1Q9H611 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 RPS15P9-201ENST00000494093 319 ntBASIC15.47■□□□□ 0.07
PIF1Q9H611 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.47■□□□□ 0.07
PIF1Q9H611 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.47■□□□□ 0.07
PIF1Q9H611 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PIF1Q9H611 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PIF1Q9H611 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.47■□□□□ 0.07
PIF1Q9H611 AC005412.3-201ENST00000580309 715 ntBASIC15.47■□□□□ 0.07
PIF1Q9H611 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.47■□□□□ 0.07
PIF1Q9H611 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 AC025062.2-201ENST00000605477 670 ntBASIC15.47■□□□□ 0.07
PIF1Q9H611 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.47■□□□□ 0.07
PIF1Q9H611 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.47■□□□□ 0.07
PIF1Q9H611 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.47■□□□□ 0.07
PIF1Q9H611 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PIF1Q9H611 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.46■□□□□ 0.07
PIF1Q9H611 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.46■□□□□ 0.07
PIF1Q9H611 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.46■□□□□ 0.07
PIF1Q9H611 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.46■□□□□ 0.07
PIF1Q9H611 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PIF1Q9H611 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.46■□□□□ 0.07
PIF1Q9H611 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.46■□□□□ 0.07
PIF1Q9H611 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.46■□□□□ 0.07
PIF1Q9H611 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.46■□□□□ 0.07
PIF1Q9H611 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.46■□□□□ 0.07
PIF1Q9H611 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.46■□□□□ 0.07
PIF1Q9H611 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
PIF1Q9H611 TPM4P1-201ENST00000436100 807 ntBASIC15.46■□□□□ 0.07
PIF1Q9H611 UNC93B7-201ENST00000509439 705 ntBASIC15.46■□□□□ 0.07
PIF1Q9H611 AF238378.1-201ENST00000526806 358 ntBASIC15.46■□□□□ 0.07
PIF1Q9H611 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.46■□□□□ 0.07
PIF1Q9H611 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 AC021087.4-201ENST00000563761 564 ntBASIC15.46■□□□□ 0.07
PIF1Q9H611 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 AL121912.1-201ENST00000603683 238 ntBASIC15.46■□□□□ 0.07
PIF1Q9H611 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.46■□□□□ 0.07
PIF1Q9H611 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.46■□□□□ 0.07
PIF1Q9H611 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.46■□□□□ 0.07
PIF1Q9H611 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PIF1Q9H611 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
PIF1Q9H611 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PIF1Q9H611 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PIF1Q9H611 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PIF1Q9H611 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.46■□□□□ 0.06
PIF1Q9H611 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
PIF1Q9H611 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.46■□□□□ 0.06
PIF1Q9H611 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
PIF1Q9H611 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.46■□□□□ 0.06
PIF1Q9H611 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
PIF1Q9H611 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PIF1Q9H611 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
PIF1Q9H611 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PIF1Q9H611 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PIF1Q9H611 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PIF1Q9H611 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.45■□□□□ 0.06
PIF1Q9H611 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms