Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 AC068587.6-202ENST00000641839 5619 ntBASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 MST1L-201ENST00000442552 2185 ntBASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 AC138035.3-201ENST00000622706 2791 ntBASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 PRSS29P-201ENST00000440800 595 ntBASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 AC006486.2-201ENST00000624246 2199 ntBASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 AC092127.1-201ENST00000567093 3455 ntBASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.63□□□□□ -0.23
HDHD3Q9BSH5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 RPS2P28-201ENST00000314255 741 ntBASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms