Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VRK1Q99986 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VRK1Q99986 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
VRK1Q99986 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VRK1Q99986 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.31□□□□□ -0.12
VRK1Q99986 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
VRK1Q99986 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VRK1Q99986 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 TFAMP1-201ENST00000412727 736 ntBASIC14.31□□□□□ -0.12
VRK1Q99986 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
VRK1Q99986 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.31□□□□□ -0.12
VRK1Q99986 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.31□□□□□ -0.12
VRK1Q99986 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.31□□□□□ -0.12
VRK1Q99986 AC087641.1-201ENST00000557561 1021 ntBASIC14.31□□□□□ -0.12
VRK1Q99986 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 AC093028.1-201ENST00000622998 982 ntBASIC14.31□□□□□ -0.12
VRK1Q99986 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.31□□□□□ -0.12
VRK1Q99986 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
VRK1Q99986 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.31□□□□□ -0.12
VRK1Q99986 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.31□□□□□ -0.12
VRK1Q99986 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
VRK1Q99986 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
VRK1Q99986 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VRK1Q99986 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
VRK1Q99986 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VRK1Q99986 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VRK1Q99986 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.3□□□□□ -0.12
VRK1Q99986 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
VRK1Q99986 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.3□□□□□ -0.12
VRK1Q99986 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.3□□□□□ -0.12
VRK1Q99986 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.3□□□□□ -0.12
VRK1Q99986 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.3□□□□□ -0.12
VRK1Q99986 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 AL592309.1-201ENST00000443127 649 ntBASIC14.3□□□□□ -0.12
VRK1Q99986 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VRK1Q99986 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.3□□□□□ -0.12
VRK1Q99986 RN7SL589P-201ENST00000481268 310 ntBASIC14.3□□□□□ -0.12
VRK1Q99986 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VRK1Q99986 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VRK1Q99986 DUX4L17-201ENST00000557360 1267 ntBASIC14.3□□□□□ -0.12
VRK1Q99986 RARRES2P8-201ENST00000566335 367 ntBASIC14.3□□□□□ -0.12
VRK1Q99986 AC091167.2-201ENST00000579581 588 ntBASIC14.3□□□□□ -0.12
VRK1Q99986 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.3□□□□□ -0.12
VRK1Q99986 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VRK1Q99986 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
VRK1Q99986 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.3□□□□□ -0.12
VRK1Q99986 AC099522.2-201ENST00000607001 744 ntBASIC14.3□□□□□ -0.12
VRK1Q99986 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.3□□□□□ -0.12
VRK1Q99986 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.3□□□□□ -0.12
VRK1Q99986 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.3□□□□□ -0.12
VRK1Q99986 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
VRK1Q99986 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.3□□□□□ -0.12
VRK1Q99986 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms