Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.35■□□□□ 0.05
CGREF1Q99674 AP002414.3-201ENST00000589352 1468 ntBASIC15.35■□□□□ 0.05
CGREF1Q99674 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.35■□□□□ 0.05
CGREF1Q99674 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.35■□□□□ 0.05
CGREF1Q99674 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.35■□□□□ 0.05
CGREF1Q99674 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CGREF1Q99674 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.35■□□□□ 0.05
CGREF1Q99674 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.35■□□□□ 0.05
CGREF1Q99674 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.35■□□□□ 0.05
CGREF1Q99674 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
CGREF1Q99674 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 RNPS1P1-201ENST00000507437 918 ntBASIC15.35■□□□□ 0.05
CGREF1Q99674 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.35■□□□□ 0.05
CGREF1Q99674 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.35■□□□□ 0.05
CGREF1Q99674 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
CGREF1Q99674 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.35■□□□□ 0.05
CGREF1Q99674 AL445228.2-201ENST00000605589 952 ntBASIC15.35■□□□□ 0.05
CGREF1Q99674 AL365330.1-201ENST00000607459 531 ntBASIC15.35■□□□□ 0.05
CGREF1Q99674 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.35■□□□□ 0.05
CGREF1Q99674 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CGREF1Q99674 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.35■□□□□ 0.05
CGREF1Q99674 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CGREF1Q99674 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.35■□□□□ 0.05
CGREF1Q99674 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CGREF1Q99674 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.34■□□□□ 0.05
CGREF1Q99674 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.34■□□□□ 0.05
CGREF1Q99674 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
CGREF1Q99674 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.34■□□□□ 0.05
CGREF1Q99674 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CGREF1Q99674 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.34■□□□□ 0.05
CGREF1Q99674 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CGREF1Q99674 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.34■□□□□ 0.05
CGREF1Q99674 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.34■□□□□ 0.05
CGREF1Q99674 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.34■□□□□ 0.05
CGREF1Q99674 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.34■□□□□ 0.05
CGREF1Q99674 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CGREF1Q99674 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.34■□□□□ 0.05
CGREF1Q99674 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CGREF1Q99674 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CGREF1Q99674 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CGREF1Q99674 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CGREF1Q99674 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CGREF1Q99674 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.33■□□□□ 0.05
CGREF1Q99674 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CGREF1Q99674 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CGREF1Q99674 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CGREF1Q99674 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.33■□□□□ 0.05
CGREF1Q99674 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CGREF1Q99674 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CGREF1Q99674 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms