Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 POU5F1P6-201ENST00000466990 990 ntBASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 AC104596.2-201ENST00000512793 793 ntBASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 AC074044.1-201ENST00000609673 707 ntBASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC46A1Q96NT5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC46A1Q96NT5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.33■□□□□ 0.05
SLC46A1Q96NT5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC46A1Q96NT5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC46A1Q96NT5 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC46A1Q96NT5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC46A1Q96NT5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC46A1Q96NT5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC46A1Q96NT5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC46A1Q96NT5 ME2P1-201ENST00000426028 1970 ntBASIC15.33■□□□□ 0.05
SLC46A1Q96NT5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.33■□□□□ 0.05
SLC46A1Q96NT5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 FAM86MP-201ENST00000340703 885 ntBASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 AC245100.3-201ENST00000441281 285 ntBASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 SNX29P1-201ENST00000548357 1007 ntBASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 RARRES2P5-201ENST00000564013 466 ntBASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 MIR4525-201ENST00000580000 75 ntBASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 CDC14C-201ENST00000428251 1719 ntBASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms