Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 AC012569.1-201ENST00000591191 1524 ntBASIC16.65■□□□□ 0.26
C9orf72Q96LT7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
C9orf72Q96LT7 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.64■□□□□ 0.26
C9orf72Q96LT7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
C9orf72Q96LT7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 AC023274.1-201ENST00000418278 595 ntBASIC16.64■□□□□ 0.25
C9orf72Q96LT7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 MIR3687-2-201ENST00000577708 61 ntBASIC16.64■□□□□ 0.25
C9orf72Q96LT7 AC010327.4-202ENST00000591484 748 ntBASIC16.64■□□□□ 0.25
C9orf72Q96LT7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 MIR3687-1-201ENST00000614492 61 ntBASIC16.64■□□□□ 0.25
C9orf72Q96LT7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 AC008677.1-201ENST00000519230 1561 ntBASIC16.64■□□□□ 0.25
C9orf72Q96LT7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.64■□□□□ 0.25
C9orf72Q96LT7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 MRPL20P1-201ENST00000400819 433 ntBASIC16.63■□□□□ 0.25
C9orf72Q96LT7 RPSAP43-201ENST00000402237 625 ntBASIC16.63■□□□□ 0.25
C9orf72Q96LT7 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.63■□□□□ 0.25
C9orf72Q96LT7 GPX1P2-201ENST00000429271 606 ntBASIC16.63■□□□□ 0.25
C9orf72Q96LT7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 HCG4B-203ENST00000450128 991 ntBASIC16.63■□□□□ 0.25
C9orf72Q96LT7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.63■□□□□ 0.25
C9orf72Q96LT7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 CICP13-201ENST00000422015 2789 ntBASIC16.63■□□□□ 0.25
C9orf72Q96LT7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 U82695.1-201ENST00000635752 1889 ntBASIC16.63■□□□□ 0.25
C9orf72Q96LT7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf72Q96LT7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 AC063926.3-201ENST00000624734 5658 ntBASIC16.62■□□□□ 0.25
C9orf72Q96LT7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms