Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHAMP1Q96JM3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHAMP1Q96JM3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.71■□□□□ 0.59
CHAMP1Q96JM3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CHAMP1Q96JM3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHAMP1Q96JM3 AC087481.3-201ENST00000602886 1894 ntBASIC18.71■□□□□ 0.59
CHAMP1Q96JM3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHAMP1Q96JM3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.71■□□□□ 0.59
CHAMP1Q96JM3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.71■□□□□ 0.59
CHAMP1Q96JM3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.71■□□□□ 0.58
CHAMP1Q96JM3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 MIR4751-201ENST00000578027 74 ntBASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 AC005593.1-201ENST00000624894 515 ntBASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHAMP1Q96JM3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 AC139749.1-202ENST00000617529 3139 ntBASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 LINC00528-201ENST00000600723 2160 ntBASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 AC108751.1-201ENST00000490852 363 ntBASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 AC021097.1-201ENST00000607902 574 ntBASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHAMP1Q96JM3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 HMGN1P19-201ENST00000436976 333 ntBASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 AP002469.2-201ENST00000531724 424 ntBASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 AC010507.1-201ENST00000633895 436 ntBASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms