Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 MIR943-201ENST00000401286 94 ntBASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 BASP1P1-201ENST00000430708 665 ntBASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 AC098859.1-201ENST00000502915 1238 ntBASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 DUX4L27-201ENST00000554796 1261 ntBASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 SPCS2P1-201ENST00000561636 679 ntBASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 RARRES2P9-201ENST00000565168 469 ntBASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 AL096865.1-201ENST00000606796 927 ntBASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 AC018529.1-201ENST00000613063 361 ntBASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 SPTSSB-204ENST00000617024 1292 ntBASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 LINC01144-201ENST00000626198 1710 ntBASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SH3KBP1Q96B97 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 AC073439.1-201ENST00000624121 1774 ntBASIC16■□□□□ 0.15
SH3KBP1Q96B97 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 CYP2T1P-202ENST00000641596 2535 ntBASIC16■□□□□ 0.15
SH3KBP1Q96B97 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 FAM8A3P-201ENST00000427218 844 ntBASIC16■□□□□ 0.15
SH3KBP1Q96B97 AC055876.3-201ENST00000431496 288 ntBASIC16■□□□□ 0.15
SH3KBP1Q96B97 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 AC069120.2-201ENST00000524091 540 ntBASIC16■□□□□ 0.15
SH3KBP1Q96B97 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 MIR3197-201ENST00000582241 73 ntBASIC16■□□□□ 0.15
SH3KBP1Q96B97 AC138649.4-201ENST00000612222 287 ntBASIC16■□□□□ 0.15
SH3KBP1Q96B97 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 AP3S2-216ENST00000617003 1561 ntBASIC16■□□□□ 0.15
SH3KBP1Q96B97 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16■□□□□ 0.15
SH3KBP1Q96B97 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SH3KBP1Q96B97 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SH3KBP1Q96B97 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SH3KBP1Q96B97 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SH3KBP1Q96B97 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SH3KBP1Q96B97 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SH3KBP1Q96B97 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.99■□□□□ 0.15
SH3KBP1Q96B97 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SH3KBP1Q96B97 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SH3KBP1Q96B97 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
SH3KBP1Q96B97 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SH3KBP1Q96B97 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SH3KBP1Q96B97 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms