Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 SPDYE12P-201ENST00000618416 771 ntBASIC17.01■□□□□ 0.31
ATP2A3Q93084 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 KRT8P39-201ENST00000396270 1433 ntBASIC17.01■□□□□ 0.31
ATP2A3Q93084 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 AL391256.1-201ENST00000443260 1855 ntBASIC17.01■□□□□ 0.31
ATP2A3Q93084 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17■□□□□ 0.31
ATP2A3Q93084 AL162727.3-201ENST00000635661 2787 ntBASIC17■□□□□ 0.31
ATP2A3Q93084 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ATP2A3Q93084 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 AC067930.6-201ENST00000623257 4947 ntBASIC17■□□□□ 0.31
ATP2A3Q93084 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17■□□□□ 0.31
ATP2A3Q93084 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ATP2A3Q93084 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
ATP2A3Q93084 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ATP2A3Q93084 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 COPE-202ENST00000349893 948 ntTSL 2 BASIC17■□□□□ 0.31
ATP2A3Q93084 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17■□□□□ 0.31
ATP2A3Q93084 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17■□□□□ 0.31
ATP2A3Q93084 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17■□□□□ 0.31
ATP2A3Q93084 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17■□□□□ 0.31
ATP2A3Q93084 HLA-V-204ENST00000476601 1289 ntBASIC17■□□□□ 0.31
ATP2A3Q93084 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17■□□□□ 0.31
ATP2A3Q93084 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17■□□□□ 0.31
ATP2A3Q93084 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17■□□□□ 0.31
ATP2A3Q93084 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
ATP2A3Q93084 AL671710.1-201ENST00000610245 2349 ntBASIC17■□□□□ 0.31
ATP2A3Q93084 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 AL590560.3-201ENST00000623350 461 ntBASIC17■□□□□ 0.31
ATP2A3Q93084 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
ATP2A3Q93084 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
ATP2A3Q93084 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ATP2A3Q93084 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A3Q93084 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 AC098859.1-201ENST00000502915 1238 ntBASIC16.99■□□□□ 0.31
ATP2A3Q93084 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 AC009118.2-201ENST00000613275 655 ntBASIC16.99■□□□□ 0.31
ATP2A3Q93084 AL138828.2-201ENST00000615812 383 ntBASIC16.99■□□□□ 0.31
ATP2A3Q93084 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 LINC02199-201ENST00000506655 2702 ntBASIC16.99■□□□□ 0.31
ATP2A3Q93084 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms