Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.28■□□□□ 0.36
SEMA4DQ92854 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 Z92544.3-201ENST00000624747 417 ntBASIC17.28■□□□□ 0.36
SEMA4DQ92854 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEMA4DQ92854 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SEMA4DQ92854 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SEMA4DQ92854 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SEMA4DQ92854 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SEMA4DQ92854 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.27■□□□□ 0.36
SEMA4DQ92854 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.27■□□□□ 0.36
SEMA4DQ92854 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SEMA4DQ92854 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SEMA4DQ92854 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SEMA4DQ92854 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SEMA4DQ92854 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.27■□□□□ 0.36
SEMA4DQ92854 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SEMA4DQ92854 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SEMA4DQ92854 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.27■□□□□ 0.36
SEMA4DQ92854 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.27■□□□□ 0.36
SEMA4DQ92854 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SEMA4DQ92854 EEF1DP4-201ENST00000446006 880 ntBASIC17.27■□□□□ 0.36
SEMA4DQ92854 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.27■□□□□ 0.36
SEMA4DQ92854 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.27■□□□□ 0.36
SEMA4DQ92854 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SEMA4DQ92854 AC026979.3-201ENST00000607315 403 ntBASIC17.27■□□□□ 0.36
SEMA4DQ92854 AC093028.1-201ENST00000622998 982 ntBASIC17.27■□□□□ 0.36
SEMA4DQ92854 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SEMA4DQ92854 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SEMA4DQ92854 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SEMA4DQ92854 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SEMA4DQ92854 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SEMA4DQ92854 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.35
SEMA4DQ92854 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SEMA4DQ92854 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SEMA4DQ92854 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SEMA4DQ92854 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
SEMA4DQ92854 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SEMA4DQ92854 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 MTND6P24-201ENST00000440466 518 ntBASIC17.26■□□□□ 0.35
SEMA4DQ92854 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 AL139384.1-201ENST00000612143 3047 ntBASIC17.26■□□□□ 0.35
SEMA4DQ92854 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 KRT8P37-201ENST00000451609 1420 ntBASIC17.26■□□□□ 0.35
SEMA4DQ92854 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SEMA4DQ92854 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SEMA4DQ92854 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SEMA4DQ92854 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms