Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 TMPOP1-202ENST00000424642 1267 ntBASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 AL121672.3-201ENST00000608644 468 ntBASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 AP001350.2-201ENST00000625104 1094 ntBASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 AL390755.1-201ENST00000623716 2027 ntBASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 AC009090.5-201ENST00000624886 2285 ntBASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 AC016734.2-201ENST00000624325 1377 ntBASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 KRT18P1-202ENST00000452408 1331 ntBASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.77□□□□□ -0.04
CNIH3Q8TBE1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 ARMC10P1-201ENST00000313754 855 ntBASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 HAUS4P1-201ENST00000406739 1145 ntBASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 PRYP5-201ENST00000451909 266 ntBASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 AC107918.2-201ENST00000530817 355 ntBASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNIH3Q8TBE1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms