Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RFWD2Q8NHY2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16■□□□□ 0.15
RFWD2Q8NHY2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RFWD2Q8NHY2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFWD2Q8NHY2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RFWD2Q8NHY2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFWD2Q8NHY2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RFWD2Q8NHY2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFWD2Q8NHY2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16■□□□□ 0.15
RFWD2Q8NHY2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFWD2Q8NHY2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFWD2Q8NHY2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RFWD2Q8NHY2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16■□□□□ 0.15
RFWD2Q8NHY2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 AL359258.3-201ENST00000622910 2331 ntBASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 AC107918.2-201ENST00000530817 355 ntBASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 AC087641.1-201ENST00000557561 1021 ntBASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 PRELID1P1-202ENST00000567272 903 ntBASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 AL591684.3-201ENST00000605187 298 ntBASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 AC105250.1-201ENST00000509378 2057 ntBASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFWD2Q8NHY2 AC007292.2-201ENST00000593524 1812 ntBASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 AC112693.3-201ENST00000624819 1983 ntBASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 MIR5100-201ENST00000579544 119 ntBASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 AP005117.1-201ENST00000584346 1413 ntBASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
RFWD2Q8NHY2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD2Q8NHY2 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.97■□□□□ 0.15
RFWD2Q8NHY2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
RFWD2Q8NHY2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms