Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 AC092850.2-201ENST00000623821 2697 ntBASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 AL161645.1-201ENST00000622716 1255 ntBASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ZNF439Q8NDP4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 WASH6P-202ENST00000359512 1437 ntBASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 AC099522.2-201ENST00000607001 744 ntBASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF439Q8NDP4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF439Q8NDP4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF439Q8NDP4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF439Q8NDP4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF439Q8NDP4 AC073439.1-201ENST00000624121 1774 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms