Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MIR1227-201ENST00000408484 88 ntBASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 MIR4750-201ENST00000584564 56 ntBASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 AC138649.2-201ENST00000615886 705 ntBASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 AC092053.1-201ENST00000605787 1936 ntBASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 AC135983.4-201ENST00000564116 1262 ntBASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 AC025279.2-201ENST00000569730 653 ntBASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 AL139011.1-202ENST00000642063 584 ntBASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC168Q8NDH2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 COX6A1P2-201ENST00000620597 330 ntBASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 AC116353.5-201ENST00000638148 1699 ntBASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 AC234644.1-201ENST00000406065 370 ntBASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 EEF1DP4-201ENST00000446006 880 ntBASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 EEF1DP6-201ENST00000449232 372 ntBASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms