Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AL592309.1-201ENST00000443127 649 ntBASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AL691403.2-201ENST00000618460 490 ntBASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 AC142381.1-201ENST00000426099 345 ntBASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 KRT8P23-201ENST00000560090 1207 ntBASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 AP000842.3-202ENST00000569238 1080 ntBASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 AC005622.1-201ENST00000636801 1703 ntBASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
C11orf42Q8N5U0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf42Q8N5U0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.48□□□□□ -0.25
C11orf42Q8N5U0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf42Q8N5U0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.48□□□□□ -0.25
C11orf42Q8N5U0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf42Q8N5U0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms