Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
SIX5Q8N196 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.48■□□□□ 0.23
SIX5Q8N196 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SIX5Q8N196 AC005229.1-201ENST00000392885 409 ntBASIC16.48■□□□□ 0.23
SIX5Q8N196 ACTG1P3-201ENST00000431775 1114 ntBASIC16.48■□□□□ 0.23
SIX5Q8N196 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.48■□□□□ 0.23
SIX5Q8N196 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SIX5Q8N196 AC036164.1-201ENST00000570544 333 ntBASIC16.48■□□□□ 0.23
SIX5Q8N196 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.48■□□□□ 0.23
SIX5Q8N196 MIR3615-201ENST00000581999 87 ntBASIC16.48■□□□□ 0.23
SIX5Q8N196 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.48■□□□□ 0.23
SIX5Q8N196 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.48■□□□□ 0.23
SIX5Q8N196 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.48■□□□□ 0.23
SIX5Q8N196 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SIX5Q8N196 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SIX5Q8N196 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.48■□□□□ 0.23
SIX5Q8N196 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.48■□□□□ 0.23
SIX5Q8N196 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.48■□□□□ 0.23
SIX5Q8N196 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX5Q8N196 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SIX5Q8N196 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.48■□□□□ 0.23
SIX5Q8N196 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
SIX5Q8N196 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 AC092506.1-202ENST00000401022 528 ntBASIC16.47■□□□□ 0.23
SIX5Q8N196 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.47■□□□□ 0.23
SIX5Q8N196 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.47■□□□□ 0.23
SIX5Q8N196 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 AC020765.3-201ENST00000613051 740 ntBASIC16.47■□□□□ 0.23
SIX5Q8N196 AL139099.5-201ENST00000635274 300 ntBASIC16.47■□□□□ 0.23
SIX5Q8N196 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.47■□□□□ 0.23
SIX5Q8N196 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SIX5Q8N196 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.47■□□□□ 0.23
SIX5Q8N196 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
SIX5Q8N196 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.47■□□□□ 0.23
SIX5Q8N196 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.47■□□□□ 0.23
SIX5Q8N196 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIX5Q8N196 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.46■□□□□ 0.23
SIX5Q8N196 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
SIX5Q8N196 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.46■□□□□ 0.23
SIX5Q8N196 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SIX5Q8N196 LINC02012-201ENST00000608206 1725 ntBASIC16.46■□□□□ 0.23
SIX5Q8N196 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.46■□□□□ 0.23
SIX5Q8N196 RPL7P3-201ENST00000441388 714 ntBASIC16.46■□□□□ 0.23
SIX5Q8N196 AC124947.2-201ENST00000547118 1133 ntBASIC16.46■□□□□ 0.23
SIX5Q8N196 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.46■□□□□ 0.23
SIX5Q8N196 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.46■□□□□ 0.23
SIX5Q8N196 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.46■□□□□ 0.23
SIX5Q8N196 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms