Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 BCRP1-201ENST00000444246 691 ntBASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 AC097493.3-201ENST00000509725 367 ntBASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 AL390955.2-201ENST00000603032 514 ntBASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 CETN4P-206ENST00000642099 2168 ntBASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 AC079328.2-201ENST00000561241 3354 ntBASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 AC105021.1-202ENST00000570572 669 ntBASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 AL365330.1-201ENST00000607459 531 ntBASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 AL589739.1-201ENST00000607720 493 ntBASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM48Q8IWZ4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms