Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC021097.1-201ENST00000607902 574 ntBASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.07■□□□□ 0.16
NUDCD3Q8IVD9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 FAM45BP-202ENST00000592932 1624 ntBASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 DUSP5P1-201ENST00000441325 1139 ntBASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 AC021087.4-201ENST00000563761 564 ntBASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 AL358472.4-201ENST00000633140 710 ntBASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUDCD3Q8IVD9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 AC107918.4-202ENST00000641623 219 ntBASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms