Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL23A1Q86Y22 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL23A1Q86Y22 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.78
COL23A1Q86Y22 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
COL23A1Q86Y22 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 HSPB1P2-201ENST00000448722 546 ntBASIC19.89■□□□□ 0.77
COL23A1Q86Y22 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 AL592424.1-201ENST00000563624 1536 ntBASIC19.89■□□□□ 0.77
COL23A1Q86Y22 AC015910.1-201ENST00000579400 975 ntBASIC19.89■□□□□ 0.77
COL23A1Q86Y22 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.89■□□□□ 0.77
COL23A1Q86Y22 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COL23A1Q86Y22 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 CD8B2-202ENST00000417670 633 ntBASIC19.88■□□□□ 0.77
COL23A1Q86Y22 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 KRT18P25-201ENST00000508931 1278 ntBASIC19.88■□□□□ 0.77
COL23A1Q86Y22 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 CU633904.3-201ENST00000624042 1029 ntBASIC19.88■□□□□ 0.77
COL23A1Q86Y22 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 AC060834.1-201ENST00000443027 2032 ntBASIC19.88■□□□□ 0.77
COL23A1Q86Y22 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL23A1Q86Y22 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.87■□□□□ 0.77
COL23A1Q86Y22 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 KRT8P35-201ENST00000483942 1338 ntBASIC19.87■□□□□ 0.77
COL23A1Q86Y22 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 RPL17P11-201ENST00000417593 544 ntBASIC19.87■□□□□ 0.77
COL23A1Q86Y22 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 NKAIN1P1-201ENST00000435754 582 ntBASIC19.87■□□□□ 0.77
COL23A1Q86Y22 SPTLC1P5-201ENST00000450718 252 ntBASIC19.87■□□□□ 0.77
COL23A1Q86Y22 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms