Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 LINC01144-201ENST00000626198 1710 ntBASIC14.41□□□□□ -0.1
LRRC28Q86X40 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 TERC-201ENST00000602385 541 ntBASIC14.41□□□□□ -0.1
LRRC28Q86X40 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 SNX33P1-201ENST00000592116 1762 ntBASIC14.41□□□□□ -0.1
LRRC28Q86X40 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 AC020658.6-201ENST00000623564 1870 ntBASIC14.41□□□□□ -0.1
LRRC28Q86X40 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LRRC28Q86X40 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC28Q86X40 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 AC136621.1-201ENST00000624017 2304 ntBASIC14.4□□□□□ -0.1
LRRC28Q86X40 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 MIR940-201ENST00000401276 94 ntBASIC14.4□□□□□ -0.1
LRRC28Q86X40 PRSS29P-201ENST00000440800 595 ntBASIC14.4□□□□□ -0.1
LRRC28Q86X40 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC28Q86X40 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LRRC28Q86X40 PCGF3-213ENST00000620529 1899 ntBASIC14.4□□□□□ -0.1
LRRC28Q86X40 PMS2P7-201ENST00000506558 1336 ntBASIC14.4□□□□□ -0.1
LRRC28Q86X40 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms