Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 AC005077.2-201ENST00000449786 690 ntBASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 PTPA-217ENST00000434095 870 ntTSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 AC012441.1-201ENST00000446669 685 ntBASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 AP006547.1-201ENST00000563435 692 ntBASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13BQ7Z7G8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 RPL17P11-201ENST00000417593 544 ntBASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 AC134407.2-201ENST00000625089 1978 ntBASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms