Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD3Q7Z3D4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LYSMD3Q7Z3D4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LYSMD3Q7Z3D4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.21■□□□□ 0.18
LYSMD3Q7Z3D4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LYSMD3Q7Z3D4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LYSMD3Q7Z3D4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LYSMD3Q7Z3D4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LYSMD3Q7Z3D4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LYSMD3Q7Z3D4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
LYSMD3Q7Z3D4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 MIR648-201ENST00000385046 94 ntBASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD3Q7Z3D4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 HAUS4P1-201ENST00000406739 1145 ntBASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 BANF1P1-201ENST00000553684 263 ntBASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms