Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 AC099063.4-201ENST00000641099 1602 ntBASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 AP005117.1-202ENST00000581724 1908 ntBASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 AC142381.1-201ENST00000426099 345 ntBASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 LINC01225-203ENST00000563550 1244 ntBASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 AC061975.2-201ENST00000581722 295 ntBASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 MTDHP5-201ENST00000598980 586 ntBASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 AC026120.1-201ENST00000611536 926 ntBASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST2H3AQ71DI3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 YBX2P1-201ENST00000394192 760 ntBASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 AC024267.1-201ENST00000582320 895 ntBASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 AC084121.4-201ENST00000641598 221 ntBASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 AF228730.8-201ENST00000642140 221 ntBASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 AC132872.4-202ENST00000622924 2756 ntBASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST2H3AQ71DI3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 AC011477.6-201ENST00000604980 1927 ntBASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST2H3AQ71DI3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms