Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 AC069335.1-201ENST00000489972 472 ntBASIC19.25■□□□□ 0.67
RNF20Q5VTR2 YBX1P5-201ENST00000509441 847 ntBASIC19.25■□□□□ 0.67
RNF20Q5VTR2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 AC055717.3-201ENST00000622967 595 ntBASIC19.25■□□□□ 0.67
RNF20Q5VTR2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF20Q5VTR2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 PRAL-201ENST00000624952 3286 ntBASIC19.24■□□□□ 0.67
RNF20Q5VTR2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 AC022145.2-201ENST00000598203 171 ntBASIC19.24■□□□□ 0.67
RNF20Q5VTR2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 AC134407.2-201ENST00000625089 1978 ntBASIC19.24■□□□□ 0.67
RNF20Q5VTR2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF20Q5VTR2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 BX842568.4-201ENST00000421222 227 ntBASIC19.23■□□□□ 0.67
RNF20Q5VTR2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 SLC25A39P2-201ENST00000537614 270 ntBASIC19.23■□□□□ 0.67
RNF20Q5VTR2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 MIR4469-201ENST00000583919 79 ntBASIC19.23■□□□□ 0.67
RNF20Q5VTR2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.23■□□□□ 0.67
RNF20Q5VTR2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 AL691432.1-201ENST00000596308 1422 ntBASIC19.23■□□□□ 0.67
RNF20Q5VTR2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms