Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 AC025062.2-201ENST00000605477 670 ntBASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 AC008608.2-201ENST00000606089 416 ntBASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 RNU1-129P-201ENST00000384064 167 ntBASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 AC245100.5-201ENST00000452108 331 ntBASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 U1.21-201ENST00000580816 167 ntBASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 AC091076.1-201ENST00000610741 619 ntBASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 MIR600HG-201ENST00000449175 5984 ntBASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC00242Q5T6M2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms