Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 TSPY19P-201ENST00000418461 509 ntBASIC15.05■□□□□ -0
RFX4Q33E94 UPK3BP1-201ENST00000428678 509 ntBASIC15.05■□□□□ -0
RFX4Q33E94 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.05■□□□□ -0
RFX4Q33E94 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.05■□□□□ -0
RFX4Q33E94 TSPY18P-201ENST00000441642 509 ntBASIC15.05■□□□□ -0
RFX4Q33E94 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.05■□□□□ -0
RFX4Q33E94 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.05■□□□□ -0
RFX4Q33E94 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 AC006504.4-201ENST00000592118 1568 ntBASIC15.05■□□□□ -0
RFX4Q33E94 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 SLC22A20-204ENST00000530038 1673 ntBASIC15.05■□□□□ -0
RFX4Q33E94 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.05■□□□□ -0
RFX4Q33E94 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.05■□□□□ -0
RFX4Q33E94 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFX4Q33E94 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
RFX4Q33E94 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.05■□□□□ -0
RFX4Q33E94 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
RFX4Q33E94 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.04■□□□□ -0
RFX4Q33E94 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.04■□□□□ -0
RFX4Q33E94 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.04■□□□□ -0
RFX4Q33E94 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.04■□□□□ -0
RFX4Q33E94 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.04■□□□□ -0
RFX4Q33E94 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.04■□□□□ -0
RFX4Q33E94 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.04■□□□□ -0
RFX4Q33E94 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RFX4Q33E94 AC091304.2-201ENST00000564639 760 ntBASIC15.04■□□□□ -0
RFX4Q33E94 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
RFX4Q33E94 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RFX4Q33E94 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.04■□□□□ -0
RFX4Q33E94 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.04■□□□□ -0
RFX4Q33E94 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 TCAF2P1-201ENST00000291129 2421 ntBASIC15.04■□□□□ -0
RFX4Q33E94 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RFX4Q33E94 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.04■□□□□ -0
RFX4Q33E94 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RFX4Q33E94 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.03■□□□□ -0
RFX4Q33E94 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.03■□□□□ -0
RFX4Q33E94 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RFX4Q33E94 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.03■□□□□ -0
RFX4Q33E94 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 CICP24-201ENST00000605464 2705 ntBASIC15.03■□□□□ -0
RFX4Q33E94 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.03■□□□□ -0
RFX4Q33E94 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFX4Q33E94 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.03■□□□□ -0
RFX4Q33E94 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
RFX4Q33E94 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFX4Q33E94 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RFX4Q33E94 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RFX4Q33E94 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms