Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.27■□□□□ 0.03
GABREP78334 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABREP78334 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABREP78334 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
GABREP78334 CYP4F24P-201ENST00000586049 1580 ntBASIC15.27■□□□□ 0.03
GABREP78334 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABREP78334 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.27■□□□□ 0.03
GABREP78334 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABREP78334 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
GABREP78334 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.26■□□□□ 0.03
GABREP78334 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.26■□□□□ 0.03
GABREP78334 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GABREP78334 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GABREP78334 MIR1908-201ENST00000410394 80 ntBASIC15.26■□□□□ 0.03
GABREP78334 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.26■□□□□ 0.03
GABREP78334 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.26■□□□□ 0.03
GABREP78334 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GABREP78334 TDH-203ENST00000531764 1110 ntBASIC15.26■□□□□ 0.03
GABREP78334 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.26■□□□□ 0.03
GABREP78334 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.26■□□□□ 0.03
GABREP78334 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.26■□□□□ 0.03
GABREP78334 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GABREP78334 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.26■□□□□ 0.03
GABREP78334 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.26■□□□□ 0.03
GABREP78334 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.26■□□□□ 0.03
GABREP78334 AC133539.2-201ENST00000604757 467 ntBASIC15.26■□□□□ 0.03
GABREP78334 AL022328.1-201ENST00000610050 478 ntBASIC15.26■□□□□ 0.03
GABREP78334 RPSAP52-203ENST00000622976 1023 ntBASIC15.26■□□□□ 0.03
GABREP78334 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.26■□□□□ 0.03
GABREP78334 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.26■□□□□ 0.03
GABREP78334 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.26■□□□□ 0.03
GABREP78334 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
GABREP78334 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GABREP78334 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GABREP78334 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.26■□□□□ 0.03
GABREP78334 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
GABREP78334 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 AC093525.8-201ENST00000624099 1342 ntBASIC15.25■□□□□ 0.03
GABREP78334 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.25■□□□□ 0.03
GABREP78334 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 BCYRN1-201ENST00000418539 200 ntBASIC15.25■□□□□ 0.03
GABREP78334 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.25■□□□□ 0.03
GABREP78334 HIST3H2BA-201ENST00000436555 524 ntBASIC15.25■□□□□ 0.03
GABREP78334 AL355994.2-201ENST00000447882 704 ntBASIC15.25■□□□□ 0.03
GABREP78334 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.25■□□□□ 0.03
GABREP78334 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 MIR6869-201ENST00000619434 62 ntBASIC15.25■□□□□ 0.03
GABREP78334 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 AL136982.4-201ENST00000437689 1740 ntBASIC15.25■□□□□ 0.03
GABREP78334 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.25■□□□□ 0.03
GABREP78334 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABREP78334 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.25■□□□□ 0.03
GABREP78334 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
GABREP78334 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
GABREP78334 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GABREP78334 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GABREP78334 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GABREP78334 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GABREP78334 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms