Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2NP61088 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
UBE2NP61088 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2NP61088 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.2□□□□□ -0.14
UBE2NP61088 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2NP61088 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UBE2NP61088 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.2□□□□□ -0.14
UBE2NP61088 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.2□□□□□ -0.14
UBE2NP61088 AC107890.1-201ENST00000422478 521 ntBASIC14.2□□□□□ -0.14
UBE2NP61088 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2NP61088 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.2□□□□□ -0.14
UBE2NP61088 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.2□□□□□ -0.14
UBE2NP61088 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.2□□□□□ -0.14
UBE2NP61088 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.2□□□□□ -0.14
UBE2NP61088 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.2□□□□□ -0.14
UBE2NP61088 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.2□□□□□ -0.14
UBE2NP61088 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 AC015911.4-201ENST00000588022 1070 ntBASIC14.2□□□□□ -0.14
UBE2NP61088 MIR4321-201ENST00000592276 80 ntBASIC14.2□□□□□ -0.14
UBE2NP61088 AC007967.4-201ENST00000614700 386 ntBASIC14.2□□□□□ -0.14
UBE2NP61088 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
UBE2NP61088 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.2□□□□□ -0.14
UBE2NP61088 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
UBE2NP61088 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UBE2NP61088 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UBE2NP61088 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.2□□□□□ -0.14
UBE2NP61088 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
UBE2NP61088 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2NP61088 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.2□□□□□ -0.14
UBE2NP61088 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
UBE2NP61088 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBE2NP61088 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2NP61088 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.19□□□□□ -0.14
UBE2NP61088 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.19□□□□□ -0.14
UBE2NP61088 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.19□□□□□ -0.14
UBE2NP61088 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.19□□□□□ -0.14
UBE2NP61088 AC006449.6-201ENST00000612330 2296 ntBASIC14.19□□□□□ -0.14
UBE2NP61088 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
UBE2NP61088 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
UBE2NP61088 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.19□□□□□ -0.14
UBE2NP61088 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2NP61088 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2NP61088 MTND6P24-201ENST00000440466 518 ntBASIC14.19□□□□□ -0.14
UBE2NP61088 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBE2NP61088 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.19□□□□□ -0.14
UBE2NP61088 RFPL4AP1-201ENST00000530883 850 ntBASIC14.19□□□□□ -0.14
UBE2NP61088 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2NP61088 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2NP61088 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.19□□□□□ -0.14
UBE2NP61088 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UBE2NP61088 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2NP61088 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
UBE2NP61088 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2NP61088 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UBE2NP61088 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
UBE2NP61088 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2NP61088 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2NP61088 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2NP61088 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2NP61088 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2NP61088 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
UBE2NP61088 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.18□□□□□ -0.14
UBE2NP61088 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2NP61088 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
UBE2NP61088 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
UBE2NP61088 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2NP61088 CICP6-201ENST00000457191 2729 ntBASIC14.18□□□□□ -0.14
UBE2NP61088 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms