Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.57■□□□□ 0.4
NCKAP1LP55160 AC009477.1-201ENST00000452936 217 ntBASIC17.57■□□□□ 0.4
NCKAP1LP55160 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.57■□□□□ 0.4
NCKAP1LP55160 AC004890.2-204ENST00000481968 304 ntBASIC17.57■□□□□ 0.4
NCKAP1LP55160 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 AC093214.1-201ENST00000511688 1107 ntBASIC17.57■□□□□ 0.4
NCKAP1LP55160 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 AL450472.2-201ENST00000603663 1156 ntBASIC17.57■□□□□ 0.4
NCKAP1LP55160 MIR6069-201ENST00000620069 79 ntBASIC17.57■□□□□ 0.4
NCKAP1LP55160 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1LP55160 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1LP55160 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1LP55160 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1LP55160 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1LP55160 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 AC018892.3-201ENST00000623986 2499 ntBASIC17.57■□□□□ 0.4
NCKAP1LP55160 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NCKAP1LP55160 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1LP55160 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 ZNF890P-202ENST00000530367 1156 ntBASIC17.56■□□□□ 0.4
NCKAP1LP55160 HNRNPUP1-201ENST00000554987 333 ntBASIC17.56■□□□□ 0.4
NCKAP1LP55160 AL355385.1-201ENST00000606123 409 ntBASIC17.56■□□□□ 0.4
NCKAP1LP55160 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 LINC02199-201ENST00000506655 2702 ntBASIC17.56■□□□□ 0.4
NCKAP1LP55160 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.56■□□□□ 0.4
NCKAP1LP55160 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1LP55160 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 AC022188.1-201ENST00000620960 1664 ntBASIC17.55■□□□□ 0.4
NCKAP1LP55160 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 AC046158.3-201ENST00000624947 2558 ntBASIC17.55■□□□□ 0.4
NCKAP1LP55160 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 BASP1P1-201ENST00000430708 665 ntBASIC17.55■□□□□ 0.4
NCKAP1LP55160 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 RN7SL618P-201ENST00000477850 296 ntBASIC17.55■□□□□ 0.4
NCKAP1LP55160 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 AC097359.3-201ENST00000603982 1210 ntBASIC17.55■□□□□ 0.4
NCKAP1LP55160 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.55■□□□□ 0.4
NCKAP1LP55160 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 AC008894.3-201ENST00000624324 3103 ntBASIC17.55■□□□□ 0.4
NCKAP1LP55160 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms