Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
COPAP53621 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.67■□□□□ 0.26
COPAP53621 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
COPAP53621 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.67■□□□□ 0.26
COPAP53621 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.67■□□□□ 0.26
COPAP53621 TERF1P3-201ENST00000505638 1227 ntBASIC16.67■□□□□ 0.26
COPAP53621 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.67■□□□□ 0.26
COPAP53621 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.67■□□□□ 0.26
COPAP53621 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.67■□□□□ 0.26
COPAP53621 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.67■□□□□ 0.26
COPAP53621 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.67■□□□□ 0.26
COPAP53621 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.67■□□□□ 0.26
COPAP53621 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 AC007967.4-201ENST00000614700 386 ntBASIC16.67■□□□□ 0.26
COPAP53621 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.67■□□□□ 0.26
COPAP53621 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.67■□□□□ 0.26
COPAP53621 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.67■□□□□ 0.26
COPAP53621 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
COPAP53621 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
COPAP53621 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.67■□□□□ 0.26
COPAP53621 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPAP53621 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COPAP53621 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.66■□□□□ 0.26
COPAP53621 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.66■□□□□ 0.26
COPAP53621 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.66■□□□□ 0.26
COPAP53621 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
COPAP53621 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 KRT8P39-201ENST00000396270 1433 ntBASIC16.66■□□□□ 0.26
COPAP53621 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.66■□□□□ 0.26
COPAP53621 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COPAP53621 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.66■□□□□ 0.26
COPAP53621 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.66■□□□□ 0.26
COPAP53621 FAM207CP-201ENST00000443486 507 ntBASIC16.66■□□□□ 0.26
COPAP53621 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COPAP53621 AL512638.1-201ENST00000457493 794 ntBASIC16.66■□□□□ 0.26
COPAP53621 AC004890.2-204ENST00000481968 304 ntBASIC16.66■□□□□ 0.26
COPAP53621 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.66■□□□□ 0.26
COPAP53621 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.66■□□□□ 0.26
COPAP53621 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.66■□□□□ 0.26
COPAP53621 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.66■□□□□ 0.26
COPAP53621 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.66■□□□□ 0.26
COPAP53621 LINC02560-201ENST00000596379 459 ntBASIC16.66■□□□□ 0.26
COPAP53621 AC003101.2-201ENST00000612557 442 ntBASIC16.66■□□□□ 0.26
COPAP53621 AC073592.8-201ENST00000624126 511 ntBASIC16.66■□□□□ 0.26
COPAP53621 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
COPAP53621 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPAP53621 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.65■□□□□ 0.26
COPAP53621 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPAP53621 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPAP53621 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COPAP53621 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPAP53621 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPAP53621 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.65■□□□□ 0.26
COPAP53621 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPAP53621 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPAP53621 AC068418.2-201ENST00000577309 3703 ntBASIC16.65■□□□□ 0.26
COPAP53621 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COPAP53621 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.65■□□□□ 0.26
COPAP53621 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.65■□□□□ 0.26
COPAP53621 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.65■□□□□ 0.26
COPAP53621 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COPAP53621 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPAP53621 AC100757.3-201ENST00000622361 1406 ntBASIC16.65■□□□□ 0.26
COPAP53621 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPAP53621 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.65■□□□□ 0.26
COPAP53621 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPAP53621 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPAP53621 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.65■□□□□ 0.26
COPAP53621 HLA-H-201ENST00000383620 1096 ntBASIC16.65■□□□□ 0.26
COPAP53621 MRPS18AP1-201ENST00000414458 589 ntBASIC16.65■□□□□ 0.26
COPAP53621 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.65■□□□□ 0.26
COPAP53621 AC241585.1-201ENST00000433527 519 ntBASIC16.65■□□□□ 0.26
COPAP53621 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.65■□□□□ 0.26
COPAP53621 AC027369.6-201ENST00000525520 931 ntBASIC16.65■□□□□ 0.26
COPAP53621 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.65■□□□□ 0.26
COPAP53621 AC190387.1-201ENST00000551683 408 ntBASIC16.65■□□□□ 0.26
COPAP53621 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms