Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
GTF2A1P52655 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
GTF2A1P52655 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
GTF2A1P52655 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
GTF2A1P52655 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.87■□□□□ 0.13
GTF2A1P52655 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.87■□□□□ 0.13
GTF2A1P52655 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
GTF2A1P52655 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 AC079776.2-201ENST00000641154 1609 ntBASIC15.86■□□□□ 0.13
GTF2A1P52655 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.86■□□□□ 0.13
GTF2A1P52655 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
GTF2A1P52655 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.86■□□□□ 0.13
GTF2A1P52655 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.86■□□□□ 0.13
GTF2A1P52655 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
GTF2A1P52655 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.86■□□□□ 0.13
GTF2A1P52655 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.86■□□□□ 0.13
GTF2A1P52655 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.86■□□□□ 0.13
GTF2A1P52655 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.86■□□□□ 0.13
GTF2A1P52655 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.86■□□□□ 0.13
GTF2A1P52655 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.86■□□□□ 0.13
GTF2A1P52655 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.86■□□□□ 0.13
GTF2A1P52655 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.86■□□□□ 0.13
GTF2A1P52655 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.86■□□□□ 0.13
GTF2A1P52655 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.86■□□□□ 0.13
GTF2A1P52655 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.86■□□□□ 0.13
GTF2A1P52655 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 AC022898.2-201ENST00000616822 1312 ntBASIC15.86■□□□□ 0.13
GTF2A1P52655 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.86■□□□□ 0.13
GTF2A1P52655 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
GTF2A1P52655 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
GTF2A1P52655 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC15.86■□□□□ 0.13
GTF2A1P52655 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GTF2A1P52655 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC15.86■□□□□ 0.13
GTF2A1P52655 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.85■□□□□ 0.13
GTF2A1P52655 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.85■□□□□ 0.13
GTF2A1P52655 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
GTF2A1P52655 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC15.85■□□□□ 0.13
GTF2A1P52655 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 AL645728.1-201ENST00000366221 2101 ntBASIC15.85■□□□□ 0.13
GTF2A1P52655 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.85■□□□□ 0.13
GTF2A1P52655 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.85■□□□□ 0.13
GTF2A1P52655 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 AC087481.3-201ENST00000602886 1894 ntBASIC15.85■□□□□ 0.13
GTF2A1P52655 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GTF2A1P52655 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 ID1-201ENST00000376105 1233 ntBASIC15.85■□□□□ 0.13
GTF2A1P52655 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.85■□□□□ 0.13
GTF2A1P52655 NUDT16P1-203ENST00000513809 620 ntBASIC15.85■□□□□ 0.13
GTF2A1P52655 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.85■□□□□ 0.13
GTF2A1P52655 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
GTF2A1P52655 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
GTF2A1P52655 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.85■□□□□ 0.13
GTF2A1P52655 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.85■□□□□ 0.13
GTF2A1P52655 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
GTF2A1P52655 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
GTF2A1P52655 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.85■□□□□ 0.13
GTF2A1P52655 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.85■□□□□ 0.13
GTF2A1P52655 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
GTF2A1P52655 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.85■□□□□ 0.13
GTF2A1P52655 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
GTF2A1P52655 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms