Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN3P51790 AC098850.1-201ENST00000419919 790 ntBASIC17.61■□□□□ 0.41
CLCN3P51790 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCN3P51790 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLCN3P51790 TARDBPP1-201ENST00000442013 1203 ntBASIC17.61■□□□□ 0.41
CLCN3P51790 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN3P51790 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLCN3P51790 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLCN3P51790 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCN3P51790 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN3P51790 CU639417.3-201ENST00000624240 1404 ntBASIC17.61■□□□□ 0.41
CLCN3P51790 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN3P51790 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLCN3P51790 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN3P51790 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.61■□□□□ 0.41
CLCN3P51790 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN3P51790 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCN3P51790 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN3P51790 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCN3P51790 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCN3P51790 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCN3P51790 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCN3P51790 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCN3P51790 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLCN3P51790 MEP1AP4-201ENST00000423244 1087 ntBASIC17.6■□□□□ 0.41
CLCN3P51790 MEIS3P1-201ENST00000495167 958 ntBASIC17.6■□□□□ 0.41
CLCN3P51790 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCN3P51790 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCN3P51790 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCN3P51790 AC123567.1-201ENST00000548294 1261 ntBASIC17.6■□□□□ 0.41
CLCN3P51790 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCN3P51790 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLCN3P51790 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCN3P51790 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCN3P51790 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
CLCN3P51790 REXO1L1P-202ENST00000608646 1974 ntBASIC17.6■□□□□ 0.41
CLCN3P51790 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCN3P51790 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CLCN3P51790 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CLCN3P51790 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CLCN3P51790 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCN3P51790 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLCN3P51790 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN3P51790 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLCN3P51790 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN3P51790 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLCN3P51790 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCN3P51790 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLCN3P51790 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 AC098614.1-201ENST00000368528 745 ntBASIC17.59■□□□□ 0.41
CLCN3P51790 AP006294.1-201ENST00000415407 339 ntBASIC17.59■□□□□ 0.41
CLCN3P51790 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCN3P51790 RPL13P2-201ENST00000440687 659 ntBASIC17.59■□□□□ 0.41
CLCN3P51790 MYCLP2-201ENST00000449268 967 ntBASIC17.59■□□□□ 0.41
CLCN3P51790 KRT17P7-201ENST00000451704 1104 ntBASIC17.59■□□□□ 0.41
CLCN3P51790 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CLCN3P51790 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLCN3P51790 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN3P51790 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.59■□□□□ 0.41
CLCN3P51790 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
CLCN3P51790 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CLCN3P51790 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCN3P51790 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN3P51790 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CLCN3P51790 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLCN3P51790 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CLCN3P51790 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.58■□□□□ 0.41
CLCN3P51790 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLCN3P51790 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.58■□□□□ 0.41
CLCN3P51790 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCN3P51790 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms