Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.34■□□□□ 0.21
HADHAP40939 CEND1P1-201ENST00000451006 455 ntBASIC16.34■□□□□ 0.21
HADHAP40939 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.34■□□□□ 0.21
HADHAP40939 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.34■□□□□ 0.21
HADHAP40939 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.34■□□□□ 0.21
HADHAP40939 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.34■□□□□ 0.21
HADHAP40939 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 AC027307.2-201ENST00000591252 911 ntBASIC16.34■□□□□ 0.21
HADHAP40939 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.34■□□□□ 0.21
HADHAP40939 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.34■□□□□ 0.21
HADHAP40939 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HADHAP40939 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.34■□□□□ 0.21
HADHAP40939 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 AC132872.4-202ENST00000622924 2756 ntBASIC16.34■□□□□ 0.21
HADHAP40939 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.34■□□□□ 0.21
HADHAP40939 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 AL589702.1-201ENST00000641229 1509 ntBASIC16.34■□□□□ 0.21
HADHAP40939 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HADHAP40939 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.34■□□□□ 0.21
HADHAP40939 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HADHAP40939 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HADHAP40939 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HADHAP40939 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HADHAP40939 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.33■□□□□ 0.21
HADHAP40939 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.33■□□□□ 0.21
HADHAP40939 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.33■□□□□ 0.21
HADHAP40939 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HADHAP40939 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HADHAP40939 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.33■□□□□ 0.21
HADHAP40939 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.33■□□□□ 0.21
HADHAP40939 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HADHAP40939 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
HADHAP40939 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HADHAP40939 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.33■□□□□ 0.2
HADHAP40939 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.33■□□□□ 0.2
HADHAP40939 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.33■□□□□ 0.2
HADHAP40939 YBX1P5-201ENST00000509441 847 ntBASIC16.33■□□□□ 0.2
HADHAP40939 IGHV3-62-201ENST00000520057 340 ntBASIC16.33■□□□□ 0.2
HADHAP40939 KRT8P23-201ENST00000560090 1207 ntBASIC16.33■□□□□ 0.2
HADHAP40939 AC243562.1-201ENST00000560672 389 ntBASIC16.33■□□□□ 0.2
HADHAP40939 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.33■□□□□ 0.2
HADHAP40939 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.33■□□□□ 0.2
HADHAP40939 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.33■□□□□ 0.2
HADHAP40939 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.33■□□□□ 0.2
HADHAP40939 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HADHAP40939 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.33■□□□□ 0.2
HADHAP40939 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.33■□□□□ 0.2
HADHAP40939 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HADHAP40939 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.33■□□□□ 0.2
HADHAP40939 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HADHAP40939 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HADHAP40939 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HADHAP40939 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HADHAP40939 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HADHAP40939 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HADHAP40939 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HADHAP40939 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HADHAP40939 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HADHAP40939 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.32■□□□□ 0.2
HADHAP40939 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.32■□□□□ 0.2
HADHAP40939 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HADHAP40939 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
HADHAP40939 GPX1P2-201ENST00000429271 606 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms