Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.4■□□□□ 0.06
KRT20P35900 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.4■□□□□ 0.06
KRT20P35900 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
KRT20P35900 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.4■□□□□ 0.06
KRT20P35900 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
KRT20P35900 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.4■□□□□ 0.06
KRT20P35900 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.4■□□□□ 0.06
KRT20P35900 AC112191.1-201ENST00000523689 701 ntBASIC15.4■□□□□ 0.06
KRT20P35900 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
KRT20P35900 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.4■□□□□ 0.06
KRT20P35900 MIR3909-201ENST00000579518 119 ntBASIC15.4■□□□□ 0.06
KRT20P35900 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.4■□□□□ 0.06
KRT20P35900 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
KRT20P35900 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.4■□□□□ 0.06
KRT20P35900 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
KRT20P35900 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KRT20P35900 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.4■□□□□ 0.06
KRT20P35900 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT20P35900 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
KRT20P35900 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT20P35900 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT20P35900 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.39■□□□□ 0.05
KRT20P35900 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 AC002056.1-201ENST00000395613 760 ntBASIC15.39■□□□□ 0.05
KRT20P35900 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT20P35900 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
KRT20P35900 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT20P35900 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.39■□□□□ 0.05
KRT20P35900 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.39■□□□□ 0.05
KRT20P35900 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.39■□□□□ 0.05
KRT20P35900 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.39■□□□□ 0.05
KRT20P35900 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT20P35900 AL513190.1-201ENST00000621254 727 ntBASIC15.39■□□□□ 0.05
KRT20P35900 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 TCAF2P1-201ENST00000291129 2421 ntBASIC15.39■□□□□ 0.05
KRT20P35900 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
KRT20P35900 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
KRT20P35900 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
KRT20P35900 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT20P35900 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
KRT20P35900 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT20P35900 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
KRT20P35900 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT20P35900 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT20P35900 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT20P35900 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT20P35900 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.38■□□□□ 0.05
KRT20P35900 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
KRT20P35900 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
KRT20P35900 AL671710.1-201ENST00000610245 2349 ntBASIC15.38■□□□□ 0.05
KRT20P35900 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT20P35900 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT20P35900 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
KRT20P35900 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT20P35900 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT20P35900 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT20P35900 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.38■□□□□ 0.05
KRT20P35900 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.38■□□□□ 0.05
KRT20P35900 AP000347.1-202ENST00000435868 847 ntBASIC15.38■□□□□ 0.05
KRT20P35900 AC140658.5-201ENST00000438532 169 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms