Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CD40P25942 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40P25942 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CD40P25942 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.86□□□□□ -0.19
CD40P25942 AC007541.1-201ENST00000570282 1469 ntBASIC13.86□□□□□ -0.19
CD40P25942 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.86□□□□□ -0.19
CD40P25942 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CD40P25942 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
CD40P25942 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
CD40P25942 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 PRORSD1P-202ENST00000563365 2154 ntBASIC13.85□□□□□ -0.19
CD40P25942 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CD40P25942 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CD40P25942 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.85□□□□□ -0.19
CD40P25942 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.85□□□□□ -0.19
CD40P25942 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CD40P25942 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CD40P25942 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.85□□□□□ -0.19
CD40P25942 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.85□□□□□ -0.19
CD40P25942 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.85□□□□□ -0.19
CD40P25942 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CD40P25942 DOC2GP-202ENST00000514950 1163 ntBASIC13.85□□□□□ -0.19
CD40P25942 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
CD40P25942 SPDYE22P-201ENST00000582158 798 ntBASIC13.85□□□□□ -0.19
CD40P25942 AL132655.2-201ENST00000596276 594 ntBASIC13.85□□□□□ -0.19
CD40P25942 AC004461.2-201ENST00000629517 803 ntBASIC13.85□□□□□ -0.19
CD40P25942 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 AC079328.2-201ENST00000561241 3354 ntBASIC13.85□□□□□ -0.19
CD40P25942 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.85□□□□□ -0.19
CD40P25942 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 AP001282.1-201ENST00000531301 1499 ntBASIC13.85□□□□□ -0.19
CD40P25942 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CD40P25942 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.85□□□□□ -0.19
CD40P25942 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.85□□□□□ -0.19
CD40P25942 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40P25942 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CD40P25942 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CD40P25942 PCDHA14-201ENST00000506751 2298 ntBASIC13.84□□□□□ -0.19
CD40P25942 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CD40P25942 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.84□□□□□ -0.19
CD40P25942 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 SPDYE19P-201ENST00000338590 713 ntBASIC13.84□□□□□ -0.19
CD40P25942 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.84□□□□□ -0.19
CD40P25942 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 AL353779.1-201ENST00000434793 351 ntBASIC13.84□□□□□ -0.19
CD40P25942 GNAQP1-201ENST00000444815 1067 ntBASIC13.84□□□□□ -0.19
CD40P25942 EEF1DP4-201ENST00000446006 880 ntBASIC13.84□□□□□ -0.19
CD40P25942 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.84□□□□□ -0.19
CD40P25942 SPDYE18-201ENST00000510091 1050 ntBASIC13.84□□□□□ -0.19
CD40P25942 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CD40P25942 AC025048.3-201ENST00000590609 569 ntBASIC13.84□□□□□ -0.19
CD40P25942 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.84□□□□□ -0.19
CD40P25942 AC074044.1-201ENST00000609673 707 ntBASIC13.84□□□□□ -0.19
CD40P25942 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.84□□□□□ -0.19
CD40P25942 AC005702.4-201ENST00000618393 416 ntBASIC13.84□□□□□ -0.19
CD40P25942 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
CD40P25942 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
CD40P25942 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms