Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX1P22670 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 AL589702.1-201ENST00000641229 1509 ntBASIC17.57■□□□□ 0.4
RFX1P22670 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX1P22670 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX1P22670 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX1P22670 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFX1P22670 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX1P22670 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFX1P22670 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX1P22670 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX1P22670 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX1P22670 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX1P22670 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RFX1P22670 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFX1P22670 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RFX1P22670 TREML5P-201ENST00000421694 576 ntBASIC17.56■□□□□ 0.4
RFX1P22670 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX1P22670 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFX1P22670 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.56■□□□□ 0.4
RFX1P22670 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX1P22670 AC051619.7-201ENST00000568314 623 ntBASIC17.56■□□□□ 0.4
RFX1P22670 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFX1P22670 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX1P22670 AC008761.3-201ENST00000624803 892 ntBASIC17.56■□□□□ 0.4
RFX1P22670 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFX1P22670 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.56■□□□□ 0.4
RFX1P22670 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX1P22670 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX1P22670 UXT-AS1-201ENST00000590504 1525 ntBASIC17.56■□□□□ 0.4
RFX1P22670 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.56■□□□□ 0.4
RFX1P22670 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFX1P22670 FO538757.1-201ENST00000623083 1397 ntBASIC17.55■□□□□ 0.4
RFX1P22670 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX1P22670 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX1P22670 AC010491.1-201ENST00000563101 2797 ntBASIC17.55■□□□□ 0.4
RFX1P22670 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RFX1P22670 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RFX1P22670 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RFX1P22670 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.55■□□□□ 0.4
RFX1P22670 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX1P22670 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
RFX1P22670 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
RFX1P22670 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX1P22670 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RFX1P22670 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RFX1P22670 MIR4321-201ENST00000592276 80 ntBASIC17.55■□□□□ 0.4
RFX1P22670 AP001059.3-201ENST00000619053 235 ntBASIC17.55■□□□□ 0.4
RFX1P22670 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX1P22670 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX1P22670 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RFX1P22670 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX1P22670 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX1P22670 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX1P22670 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFX1P22670 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RFX1P22670 AP005117.1-202ENST00000581724 1908 ntBASIC17.55■□□□□ 0.4
RFX1P22670 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFX1P22670 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.54■□□□□ 0.4
RFX1P22670 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFX1P22670 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RFX1P22670 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.54■□□□□ 0.4
RFX1P22670 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX1P22670 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.54■□□□□ 0.4
RFX1P22670 SPDYE7P-202ENST00000420373 878 ntBASIC17.54■□□□□ 0.4
RFX1P22670 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.54■□□□□ 0.4
RFX1P22670 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX1P22670 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.54■□□□□ 0.4
RFX1P22670 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.54■□□□□ 0.4
RFX1P22670 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.54■□□□□ 0.4
RFX1P22670 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms