Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RAB4AP20338 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RAB4AP20338 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 TUBB8P12-201ENST00000308911 1335 ntBASIC12.42□□□□□ -0.42
RAB4AP20338 TUBB7P-202ENST00000428444 1305 ntBASIC12.42□□□□□ -0.42
RAB4AP20338 TUBB8P7-204ENST00000567960 1332 ntBASIC12.42□□□□□ -0.42
RAB4AP20338 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 GPR89P-201ENST00000407924 1495 ntBASIC12.42□□□□□ -0.42
RAB4AP20338 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB4AP20338 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RAB4AP20338 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 REXO1L1P-202ENST00000608646 1974 ntBASIC12.42□□□□□ -0.42
RAB4AP20338 AC097637.2-201ENST00000624096 1997 ntBASIC12.42□□□□□ -0.42
RAB4AP20338 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RAB4AP20338 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RAB4AP20338 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RAB4AP20338 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB4AP20338 AL390955.1-201ENST00000428694 934 ntBASIC12.42□□□□□ -0.42
RAB4AP20338 AC068472.1-201ENST00000474589 881 ntBASIC12.42□□□□□ -0.42
RAB4AP20338 AC128688.1-201ENST00000487626 519 ntBASIC12.42□□□□□ -0.42
RAB4AP20338 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.42□□□□□ -0.42
RAB4AP20338 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB4AP20338 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.42□□□□□ -0.42
RAB4AP20338 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RAB4AP20338 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RAB4AP20338 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB4AP20338 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB4AP20338 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RAB4AP20338 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RAB4AP20338 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RAB4AP20338 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB4AP20338 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB4AP20338 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 AL596087.1-201ENST00000400979 1969 ntBASIC12.41□□□□□ -0.42
RAB4AP20338 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
RAB4AP20338 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 INGX-201ENST00000359239 846 ntBASIC12.41□□□□□ -0.42
RAB4AP20338 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 AP000523.1-201ENST00000398242 1049 ntBASIC12.41□□□□□ -0.42
RAB4AP20338 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RAB4AP20338 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.41□□□□□ -0.42
RAB4AP20338 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB4AP20338 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms