Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 MKNK2P1-201ENST00000437526 628 ntBASIC14.98□□□□□ -0.01
UBL4AP11441 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.98□□□□□ -0.01
UBL4AP11441 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.98□□□□□ -0.01
UBL4AP11441 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UBL4AP11441 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.98□□□□□ -0.01
UBL4AP11441 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.98□□□□□ -0.01
UBL4AP11441 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UBL4AP11441 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
UBL4AP11441 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL4AP11441 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
UBL4AP11441 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL4AP11441 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.97□□□□□ -0.01
UBL4AP11441 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL4AP11441 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UBL4AP11441 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
UBL4AP11441 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL4AP11441 FAM45BP-202ENST00000592932 1624 ntBASIC14.97□□□□□ -0.01
UBL4AP11441 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
UBL4AP11441 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.97□□□□□ -0.01
UBL4AP11441 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.97□□□□□ -0.01
UBL4AP11441 HTR5BP-201ENST00000430851 1154 ntBASIC14.97□□□□□ -0.01
UBL4AP11441 ADH5P3-201ENST00000433842 1137 ntBASIC14.97□□□□□ -0.01
UBL4AP11441 SPDYE11-202ENST00000450699 704 ntBASIC14.97□□□□□ -0.01
UBL4AP11441 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL4AP11441 ALG1L5P-201ENST00000482043 771 ntBASIC14.97□□□□□ -0.01
UBL4AP11441 AC105233.2-201ENST00000523697 349 ntBASIC14.97□□□□□ -0.01
UBL4AP11441 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.97□□□□□ -0.01
UBL4AP11441 AF228730.5-201ENST00000530288 346 ntBASIC14.97□□□□□ -0.01
UBL4AP11441 SPDYE9P-201ENST00000570642 692 ntBASIC14.97□□□□□ -0.01
UBL4AP11441 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
UBL4AP11441 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.97□□□□□ -0.01
UBL4AP11441 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
UBL4AP11441 SPDYE10P-202ENST00000612005 668 ntBASIC14.97□□□□□ -0.01
UBL4AP11441 SPDYE8P-202ENST00000612377 668 ntBASIC14.97□□□□□ -0.01
UBL4AP11441 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL4AP11441 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
UBL4AP11441 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.97□□□□□ -0.01
UBL4AP11441 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UBL4AP11441 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
UBL4AP11441 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.97□□□□□ -0.01
UBL4AP11441 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
UBL4AP11441 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL4AP11441 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL4AP11441 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL4AP11441 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBL4AP11441 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL4AP11441 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL4AP11441 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.96□□□□□ -0.01
UBL4AP11441 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
UBL4AP11441 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
UBL4AP11441 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL4AP11441 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL4AP11441 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL4AP11441 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.96□□□□□ -0.01
UBL4AP11441 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL4AP11441 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL4AP11441 PRAL-201ENST00000624952 3286 ntBASIC14.96□□□□□ -0.01
UBL4AP11441 PKD1P5-201ENST00000532415 10291 ntBASIC14.96□□□□□ -0.01
UBL4AP11441 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.96□□□□□ -0.01
UBL4AP11441 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL4AP11441 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL4AP11441 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms