Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
UBCP0CG48 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
UBCP0CG48 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
UBCP0CG48 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
UBCP0CG48 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.19□□□□□ -0.14
UBCP0CG48 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.19□□□□□ -0.14
UBCP0CG48 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.19□□□□□ -0.14
UBCP0CG48 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.19□□□□□ -0.14
UBCP0CG48 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.19□□□□□ -0.14
UBCP0CG48 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
UBCP0CG48 FAM215A-202ENST00000632077 792 ntBASIC14.19□□□□□ -0.14
UBCP0CG48 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.19□□□□□ -0.14
UBCP0CG48 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.19□□□□□ -0.14
UBCP0CG48 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.19□□□□□ -0.14
UBCP0CG48 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.19□□□□□ -0.14
UBCP0CG48 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBCP0CG48 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.19□□□□□ -0.14
UBCP0CG48 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
UBCP0CG48 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
UBCP0CG48 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
UBCP0CG48 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.18□□□□□ -0.14
UBCP0CG48 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
UBCP0CG48 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
UBCP0CG48 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.18□□□□□ -0.14
UBCP0CG48 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.18□□□□□ -0.14
UBCP0CG48 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBCP0CG48 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBCP0CG48 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
UBCP0CG48 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.17□□□□□ -0.14
UBCP0CG48 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
UBCP0CG48 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
UBCP0CG48 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.17□□□□□ -0.14
UBCP0CG48 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
UBCP0CG48 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.17□□□□□ -0.14
UBCP0CG48 VN2R19P-201ENST00000442399 1052 ntBASIC14.17□□□□□ -0.14
UBCP0CG48 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 EMBP1-201ENST00000458200 901 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms