Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 CICP13-201ENST00000422015 2789 ntBASIC17.5■□□□□ 0.39
CCDC172P0C7W6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 AC004877.2-201ENST00000623941 599 ntBASIC17.5■□□□□ 0.39
CCDC172P0C7W6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 AC025580.3-201ENST00000617932 1424 ntBASIC17.49■□□□□ 0.39
CCDC172P0C7W6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC172P0C7W6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 WASH6P-202ENST00000359512 1437 ntBASIC17.48■□□□□ 0.39
CCDC172P0C7W6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 AC064836.3-201ENST00000607928 673 ntBASIC17.48■□□□□ 0.39
CCDC172P0C7W6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC172P0C7W6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms