Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.02□□□□□ -0.16
CSF1P09603 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.02□□□□□ -0.16
CSF1P09603 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.02□□□□□ -0.16
CSF1P09603 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
CSF1P09603 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CSF1P09603 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.02□□□□□ -0.17
CSF1P09603 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.02□□□□□ -0.17
CSF1P09603 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSF1P09603 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CSF1P09603 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSF1P09603 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSF1P09603 LINC00982-205ENST00000420957 435 ntBASIC14.02□□□□□ -0.17
CSF1P09603 BX842568.4-201ENST00000421222 227 ntBASIC14.02□□□□□ -0.17
CSF1P09603 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.02□□□□□ -0.17
CSF1P09603 RPL13AP23-201ENST00000480739 586 ntBASIC14.02□□□□□ -0.17
CSF1P09603 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.02□□□□□ -0.17
CSF1P09603 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CSF1P09603 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.02□□□□□ -0.17
CSF1P09603 AC148477.8-201ENST00000624298 468 ntBASIC14.02□□□□□ -0.17
CSF1P09603 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.02□□□□□ -0.17
CSF1P09603 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.02□□□□□ -0.17
CSF1P09603 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CSF1P09603 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSF1P09603 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSF1P09603 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSF1P09603 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSF1P09603 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CSF1P09603 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSF1P09603 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.02□□□□□ -0.17
CSF1P09603 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSF1P09603 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSF1P09603 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CSF1P09603 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSF1P09603 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.01□□□□□ -0.17
CSF1P09603 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CSF1P09603 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.01□□□□□ -0.17
CSF1P09603 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.01□□□□□ -0.17
CSF1P09603 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CSF1P09603 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 PMPCAP1-201ENST00000508114 1576 ntBASIC14.01□□□□□ -0.17
CSF1P09603 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.01□□□□□ -0.17
CSF1P09603 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.01□□□□□ -0.17
CSF1P09603 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CSF1P09603 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.01□□□□□ -0.17
CSF1P09603 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.01□□□□□ -0.17
CSF1P09603 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.01□□□□□ -0.17
CSF1P09603 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.01□□□□□ -0.17
CSF1P09603 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.01□□□□□ -0.17
CSF1P09603 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.01□□□□□ -0.17
CSF1P09603 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.01□□□□□ -0.17
CSF1P09603 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.01□□□□□ -0.17
CSF1P09603 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.01□□□□□ -0.17
CSF1P09603 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CSF1P09603 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.01□□□□□ -0.17
CSF1P09603 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 AC007292.2-201ENST00000593524 1812 ntBASIC14.01□□□□□ -0.17
CSF1P09603 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CSF1P09603 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.01□□□□□ -0.17
CSF1P09603 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CSF1P09603 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.01□□□□□ -0.17
CSF1P09603 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.01□□□□□ -0.17
CSF1P09603 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.01□□□□□ -0.17
CSF1P09603 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.01□□□□□ -0.17
CSF1P09603 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.01□□□□□ -0.17
CSF1P09603 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSF1P09603 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CSF1P09603 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CSF1P09603 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSF1P09603 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSF1P09603 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms