Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.21■□□□□ 0.35
C4BPAP04003 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
C4BPAP04003 AC055876.3-201ENST00000431496 288 ntBASIC17.21■□□□□ 0.35
C4BPAP04003 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C4BPAP04003 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.21■□□□□ 0.35
C4BPAP04003 AL512361.1-201ENST00000554200 418 ntBASIC17.21■□□□□ 0.35
C4BPAP04003 HNRNPUP1-201ENST00000554987 333 ntBASIC17.21■□□□□ 0.35
C4BPAP04003 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.21■□□□□ 0.35
C4BPAP04003 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.21■□□□□ 0.35
C4BPAP04003 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.21■□□□□ 0.35
C4BPAP04003 AC138649.4-201ENST00000612222 287 ntBASIC17.21■□□□□ 0.35
C4BPAP04003 AL590560.3-201ENST00000623350 461 ntBASIC17.21■□□□□ 0.35
C4BPAP04003 AL033527.5-202ENST00000641632 1098 ntBASIC17.21■□□□□ 0.35
C4BPAP04003 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
C4BPAP04003 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.21■□□□□ 0.35
C4BPAP04003 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C4BPAP04003 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C4BPAP04003 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
C4BPAP04003 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
C4BPAP04003 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.2■□□□□ 0.34
C4BPAP04003 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
C4BPAP04003 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
C4BPAP04003 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.2■□□□□ 0.34
C4BPAP04003 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
C4BPAP04003 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 TSSK5P-201ENST00000423978 907 ntBASIC17.2■□□□□ 0.34
C4BPAP04003 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.2■□□□□ 0.34
C4BPAP04003 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.2■□□□□ 0.34
C4BPAP04003 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.2■□□□□ 0.34
C4BPAP04003 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.2■□□□□ 0.34
C4BPAP04003 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
C4BPAP04003 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.2■□□□□ 0.34
C4BPAP04003 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.2■□□□□ 0.34
C4BPAP04003 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
C4BPAP04003 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.2■□□□□ 0.34
C4BPAP04003 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
C4BPAP04003 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.2■□□□□ 0.34
C4BPAP04003 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C4BPAP04003 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
C4BPAP04003 AC100757.3-201ENST00000622361 1406 ntBASIC17.2■□□□□ 0.34
C4BPAP04003 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
C4BPAP04003 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.2■□□□□ 0.34
C4BPAP04003 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
C4BPAP04003 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.19■□□□□ 0.34
C4BPAP04003 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.19■□□□□ 0.34
C4BPAP04003 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
C4BPAP04003 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.19■□□□□ 0.34
C4BPAP04003 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 AC136604.1-201ENST00000418535 575 ntBASIC17.19■□□□□ 0.34
C4BPAP04003 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.19■□□□□ 0.34
C4BPAP04003 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.19■□□□□ 0.34
C4BPAP04003 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.19■□□□□ 0.34
C4BPAP04003 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.19■□□□□ 0.34
C4BPAP04003 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
C4BPAP04003 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.19■□□□□ 0.34
C4BPAP04003 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.19■□□□□ 0.34
C4BPAP04003 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
C4BPAP04003 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
C4BPAP04003 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C4BPAP04003 AC087499.5-201ENST00000452760 1342 ntBASIC17.19■□□□□ 0.34
C4BPAP04003 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
C4BPAP04003 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
C4BPAP04003 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms