Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TIMP1P01033 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TIMP1P01033 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TIMP1P01033 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.17■□□□□ 0.34
TIMP1P01033 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.16■□□□□ 0.34
TIMP1P01033 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.16■□□□□ 0.34
TIMP1P01033 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TIMP1P01033 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TIMP1P01033 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.16■□□□□ 0.34
TIMP1P01033 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.16■□□□□ 0.34
TIMP1P01033 CD8B2-202ENST00000417670 633 ntBASIC17.16■□□□□ 0.34
TIMP1P01033 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.16■□□□□ 0.34
TIMP1P01033 HINT2P1-201ENST00000419438 481 ntBASIC17.16■□□□□ 0.34
TIMP1P01033 MPRIPP1-201ENST00000452433 1089 ntBASIC17.16■□□□□ 0.34
TIMP1P01033 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 MIR3619-201ENST00000579667 83 ntBASIC17.16■□□□□ 0.34
TIMP1P01033 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 AL096828.3-201ENST00000615354 462 ntBASIC17.16■□□□□ 0.34
TIMP1P01033 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.16■□□□□ 0.34
TIMP1P01033 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.16■□□□□ 0.34
TIMP1P01033 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.16■□□□□ 0.34
TIMP1P01033 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.16■□□□□ 0.34
TIMP1P01033 REXO1L1P-202ENST00000608646 1974 ntBASIC17.16■□□□□ 0.34
TIMP1P01033 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.16■□□□□ 0.34
TIMP1P01033 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 AP001282.1-201ENST00000531301 1499 ntBASIC17.16■□□□□ 0.34
TIMP1P01033 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP1P01033 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TIMP1P01033 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.16■□□□□ 0.34
TIMP1P01033 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TIMP1P01033 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.16■□□□□ 0.34
TIMP1P01033 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TIMP1P01033 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TIMP1P01033 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TIMP1P01033 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TIMP1P01033 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.15■□□□□ 0.34
TIMP1P01033 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.15■□□□□ 0.34
TIMP1P01033 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.15■□□□□ 0.34
TIMP1P01033 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.15■□□□□ 0.34
TIMP1P01033 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.15■□□□□ 0.34
TIMP1P01033 RN7SL769P-201ENST00000469386 295 ntBASIC17.15■□□□□ 0.34
TIMP1P01033 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
TIMP1P01033 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.15■□□□□ 0.34
TIMP1P01033 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
TIMP1P01033 MIR4722-201ENST00000578292 60 ntBASIC17.15■□□□□ 0.34
TIMP1P01033 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.15■□□□□ 0.34
TIMP1P01033 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.15■□□□□ 0.34
TIMP1P01033 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
TIMP1P01033 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TIMP1P01033 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TIMP1P01033 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TIMP1P01033 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TIMP1P01033 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TIMP1P01033 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.15■□□□□ 0.34
TIMP1P01033 PCDHB18P-201ENST00000524813 2368 ntBASIC17.15■□□□□ 0.34
TIMP1P01033 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP1P01033 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.14■□□□□ 0.34
TIMP1P01033 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.14■□□□□ 0.34
TIMP1P01033 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TIMP1P01033 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 KRT8P19-201ENST00000551916 1455 ntBASIC17.14■□□□□ 0.33
TIMP1P01033 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TIMP1P01033 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TIMP1P01033 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.14■□□□□ 0.33
TIMP1P01033 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMP1P01033 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
TIMP1P01033 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.14■□□□□ 0.33
TIMP1P01033 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms