Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLPTM1O96005 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLPTM1O96005 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPTM1O96005 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLPTM1O96005 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLPTM1O96005 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPTM1O96005 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
CLPTM1O96005 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CLPTM1O96005 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.3■□□□□ 0.04
CLPTM1O96005 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.3■□□□□ 0.04
CLPTM1O96005 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLPTM1O96005 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.3■□□□□ 0.04
CLPTM1O96005 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.3■□□□□ 0.04
CLPTM1O96005 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.3■□□□□ 0.04
CLPTM1O96005 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.3■□□□□ 0.04
CLPTM1O96005 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLPTM1O96005 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLPTM1O96005 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.3■□□□□ 0.04
CLPTM1O96005 AL732292.2-201ENST00000609649 430 ntBASIC15.3■□□□□ 0.04
CLPTM1O96005 AC019129.2-201ENST00000609837 1235 ntBASIC15.3■□□□□ 0.04
CLPTM1O96005 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.3■□□□□ 0.04
CLPTM1O96005 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLPTM1O96005 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.3■□□□□ 0.04
CLPTM1O96005 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.3■□□□□ 0.04
CLPTM1O96005 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLPTM1O96005 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPTM1O96005 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPTM1O96005 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPTM1O96005 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLPTM1O96005 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.29■□□□□ 0.04
CLPTM1O96005 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 AC117489.1-201ENST00000625169 3217 ntBASIC15.29■□□□□ 0.04
CLPTM1O96005 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLPTM1O96005 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 AC125634.1-201ENST00000438758 1403 ntBASIC15.29■□□□□ 0.04
CLPTM1O96005 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 ST20-AS1-201ENST00000560255 4223 ntBASIC15.29■□□□□ 0.04
CLPTM1O96005 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CLPTM1O96005 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 NUS1P2-201ENST00000417358 873 ntBASIC15.29■□□□□ 0.04
CLPTM1O96005 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.29■□□□□ 0.04
CLPTM1O96005 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPTM1O96005 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.29■□□□□ 0.04
CLPTM1O96005 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.29■□□□□ 0.04
CLPTM1O96005 AC096582.2-201ENST00000510860 516 ntBASIC15.29■□□□□ 0.04
CLPTM1O96005 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.29■□□□□ 0.04
CLPTM1O96005 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.29■□□□□ 0.04
CLPTM1O96005 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.29■□□□□ 0.04
CLPTM1O96005 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPTM1O96005 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.29■□□□□ 0.04
CLPTM1O96005 BNIP3P18-201ENST00000593976 575 ntBASIC15.29■□□□□ 0.04
CLPTM1O96005 AL138831.2-201ENST00000606564 490 ntBASIC15.29■□□□□ 0.04
CLPTM1O96005 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
CLPTM1O96005 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.29■□□□□ 0.04
CLPTM1O96005 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPTM1O96005 AC087481.3-201ENST00000602886 1894 ntBASIC15.29■□□□□ 0.04
CLPTM1O96005 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1O96005 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1O96005 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.28■□□□□ 0.04
CLPTM1O96005 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1O96005 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLPTM1O96005 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1O96005 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1O96005 AC013726.1-201ENST00000563747 2285 ntBASIC15.28■□□□□ 0.04
CLPTM1O96005 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLPTM1O96005 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1O96005 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPTM1O96005 AC004817.3-201ENST00000602957 2129 ntBASIC15.28■□□□□ 0.04
CLPTM1O96005 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1O96005 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLPTM1O96005 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1O96005 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1O96005 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPTM1O96005 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPTM1O96005 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms