Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN11O75508 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN11O75508 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN11O75508 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CLDN11O75508 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN11O75508 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 AC069224.1-201ENST00000566372 1715 ntBASIC16.4■□□□□ 0.22
CLDN11O75508 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN11O75508 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLDN11O75508 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN11O75508 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 AZGP1P1-201ENST00000411909 902 ntBASIC16.4■□□□□ 0.22
CLDN11O75508 FAM207CP-201ENST00000443486 507 ntBASIC16.4■□□□□ 0.22
CLDN11O75508 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN11O75508 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN11O75508 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN11O75508 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN11O75508 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLDN11O75508 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN11O75508 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CLDN11O75508 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN11O75508 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN11O75508 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN11O75508 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN11O75508 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
CLDN11O75508 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN11O75508 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLDN11O75508 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CLDN11O75508 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN11O75508 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN11O75508 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN11O75508 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN11O75508 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN11O75508 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.39■□□□□ 0.21
CLDN11O75508 PHKG1P2-201ENST00000457537 863 ntBASIC16.39■□□□□ 0.21
CLDN11O75508 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN11O75508 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 AC044860.1-202ENST00000559481 777 ntBASIC16.39■□□□□ 0.21
CLDN11O75508 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.39■□□□□ 0.21
CLDN11O75508 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.39■□□□□ 0.21
CLDN11O75508 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN11O75508 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN11O75508 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLDN11O75508 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CLDN11O75508 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN11O75508 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN11O75508 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN11O75508 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN11O75508 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN11O75508 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN11O75508 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN11O75508 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN11O75508 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN11O75508 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN11O75508 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN11O75508 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLDN11O75508 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN11O75508 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN11O75508 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN11O75508 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
CLDN11O75508 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN11O75508 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms