Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.39■□□□□ 0.21
PMPCBO75439 AC008677.1-201ENST00000519230 1561 ntBASIC16.39■□□□□ 0.21
PMPCBO75439 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.39■□□□□ 0.21
PMPCBO75439 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.39■□□□□ 0.21
PMPCBO75439 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PMPCBO75439 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PMPCBO75439 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 FAM220BP-201ENST00000377689 816 ntBASIC16.39■□□□□ 0.21
PMPCBO75439 AL627223.1-201ENST00000416693 442 ntBASIC16.39■□□□□ 0.21
PMPCBO75439 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.39■□□□□ 0.21
PMPCBO75439 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.39■□□□□ 0.21
PMPCBO75439 AP000344.2-201ENST00000512987 629 ntBASIC16.39■□□□□ 0.21
PMPCBO75439 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.39■□□□□ 0.21
PMPCBO75439 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.39■□□□□ 0.21
PMPCBO75439 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.39■□□□□ 0.21
PMPCBO75439 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.39■□□□□ 0.21
PMPCBO75439 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.39■□□□□ 0.21
PMPCBO75439 AC084121.4-201ENST00000641598 221 ntBASIC16.39■□□□□ 0.21
PMPCBO75439 AC134684.3-201ENST00000641758 218 ntBASIC16.39■□□□□ 0.21
PMPCBO75439 AF228730.8-201ENST00000642140 221 ntBASIC16.39■□□□□ 0.21
PMPCBO75439 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.39■□□□□ 0.21
PMPCBO75439 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.39■□□□□ 0.21
PMPCBO75439 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.39■□□□□ 0.21
PMPCBO75439 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PMPCBO75439 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.39■□□□□ 0.21
PMPCBO75439 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.39■□□□□ 0.21
PMPCBO75439 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.39■□□□□ 0.21
PMPCBO75439 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMPCBO75439 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
PMPCBO75439 AP3S2-216ENST00000617003 1561 ntBASIC16.38■□□□□ 0.21
PMPCBO75439 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.38■□□□□ 0.21
PMPCBO75439 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.38■□□□□ 0.21
PMPCBO75439 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMPCBO75439 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMPCBO75439 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.38■□□□□ 0.21
PMPCBO75439 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PMPCBO75439 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.38■□□□□ 0.21
PMPCBO75439 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.38■□□□□ 0.21
PMPCBO75439 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PMPCBO75439 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PMPCBO75439 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.38■□□□□ 0.21
PMPCBO75439 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.38■□□□□ 0.21
PMPCBO75439 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.38■□□□□ 0.21
PMPCBO75439 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PMPCBO75439 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PMPCBO75439 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PMPCBO75439 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.38■□□□□ 0.21
PMPCBO75439 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.38■□□□□ 0.21
PMPCBO75439 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.38■□□□□ 0.21
PMPCBO75439 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.38■□□□□ 0.21
PMPCBO75439 AC004835.2-201ENST00000603762 682 ntBASIC16.38■□□□□ 0.21
PMPCBO75439 GPALPP1-207ENST00000611650 899 ntBASIC16.38■□□□□ 0.21
PMPCBO75439 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.38■□□□□ 0.21
PMPCBO75439 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.38■□□□□ 0.21
PMPCBO75439 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PMPCBO75439 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.38■□□□□ 0.21
PMPCBO75439 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.38■□□□□ 0.21
PMPCBO75439 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMPCBO75439 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMPCBO75439 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PMPCBO75439 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMPCBO75439 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMPCBO75439 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.38■□□□□ 0.21
PMPCBO75439 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.38■□□□□ 0.21
PMPCBO75439 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.38■□□□□ 0.21
PMPCBO75439 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMPCBO75439 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMPCBO75439 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PMPCBO75439 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMPCBO75439 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMPCBO75439 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PMPCBO75439 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.37■□□□□ 0.21
PMPCBO75439 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMPCBO75439 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.37■□□□□ 0.21
PMPCBO75439 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PMPCBO75439 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PMPCBO75439 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMPCBO75439 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMPCBO75439 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.37■□□□□ 0.21
PMPCBO75439 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMPCBO75439 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PMPCBO75439 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms