Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM3O75382 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TRIM3O75382 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TRIM3O75382 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM3O75382 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM3O75382 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM3O75382 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.1■□□□□ 0.01
TRIM3O75382 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.1■□□□□ 0.01
TRIM3O75382 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 AC027307.2-201ENST00000591252 911 ntBASIC15.1■□□□□ 0.01
TRIM3O75382 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM3O75382 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM3O75382 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRIM3O75382 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM3O75382 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM3O75382 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM3O75382 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM3O75382 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRIM3O75382 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM3O75382 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.09■□□□□ 0.01
TRIM3O75382 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM3O75382 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRIM3O75382 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TRIM3O75382 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRIM3O75382 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.09■□□□□ 0.01
TRIM3O75382 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRIM3O75382 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 MIR346-201ENST00000362234 95 ntBASIC15.09■□□□□ 0.01
TRIM3O75382 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRIM3O75382 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM3O75382 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRIM3O75382 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM3O75382 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM3O75382 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.09■□□□□ 0.01
TRIM3O75382 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.09■□□□□ 0.01
TRIM3O75382 FAM58DP-201ENST00000428076 619 ntBASIC15.09■□□□□ 0.01
TRIM3O75382 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.09■□□□□ 0.01
TRIM3O75382 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.09■□□□□ 0.01
TRIM3O75382 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM3O75382 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
TRIM3O75382 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.09■□□□□ 0.01
TRIM3O75382 AL138918.1-201ENST00000568306 659 ntBASIC15.09■□□□□ 0.01
TRIM3O75382 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM3O75382 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM3O75382 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM3O75382 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
TRIM3O75382 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM3O75382 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRIM3O75382 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM3O75382 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM3O75382 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM3O75382 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM3O75382 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.08■□□□□ 0.01
TRIM3O75382 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRIM3O75382 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.08■□□□□ 0.01
TRIM3O75382 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRIM3O75382 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRIM3O75382 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRIM3O75382 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms